Lead in PDB 8gbm: Porous Framework Formed By Assembly of A Bipyridyl-Conjugated Helical Peptide

The structure of Porous Framework Formed By Assembly of A Bipyridyl-Conjugated Helical Peptide, PDB code: 8gbm was solved by S.S.Hess, A.I.Nguyen, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å)	15.20 / 1.04
Space group	C 2 2 21
Cell size a, b, c (Å), α, β, γ (°)	10.003, 31.631, 54.836, 90, 90, 90
R / Rfree (%)	17 / 19.5

The binding sites of Lead atom in the Porous Framework Formed By Assembly of A Bipyridyl-Conjugated Helical Peptide (pdb code 8gbm). This binding sites where shown within 5.0 Angstroms radius around Lead atom.
In total only one binding site of Lead was determined in the Porous Framework Formed By Assembly of A Bipyridyl-Conjugated Helical Peptide, PDB code: 8gbm:

Lead binding site 1 out of 1 in the Porous Framework Formed By Assembly of A Bipyridyl-Conjugated Helical Peptide


Mono view


Stereo pair view

A full contact list of Lead with other atoms in the Pb binding site number 1 of Porous Framework Formed By Assembly of A Bipyridyl-Conjugated Helical Peptide within 5.0Å range: probe atom residue distance (Å) B Occ A:Pb103 b:19.3 occ:1.00 OXT A:ACT104 2.3 19.7 1.0 O A:ACT104 2.7 22.7 1.0 SG A:CYS7 2.7 15.2 1.0 C A:ACT104 2.8 20.8 1.0 HB2 A:CYS7 3.3 16.0 1.0 HA A:ALA4 3.4 14.1 1.0 CB A:CYS7 3.6 13.3 1.0 HB3 A:CYS7 3.8 16.0 1.0 O A:AIB3 4.0 11.5 1.0 HB21 A:AIB3 4.2 13.5 1.0 C A:AIB3 4.3 11.9 1.0 CA A:ALA4 4.3 11.7 1.0 CH3 A:ACT104 4.3 10.2 1.0 N A:ALA4 4.4 12.9 1.0 HB23 A:AIB3 4.4 13.5 1.0 H3 A:ACT104 4.7 12.3 1.0 H A:CYS7 4.7 13.2 1.0 CB2 A:AIB3 4.7 11.2 1.0 H1 A:ACT104 4.7 12.3 1.0 O A:HOH203 4.7 25.0 1.0 H2 A:ACT104 4.8 12.3 1.0 HB2 A:ALA4 4.8 14.1 1.0 H A:ALA4 4.9 15.5 1.0 CA A:CYS7 5.0 11.7 1.0

S.S.Hess, F.Coppola, V.T.Dang, P.N.Tran, P.J.Mickel, J.Oktawiec, Z.Ren, P.Kral, A.I.Nguyen. Noncovalent Peptide Assembly Enables Crystalline, Permutable, and Reactive Thiol Frameworks. J.Am.Chem.Soc. V. 145 19588 2023.
ISSN: ESSN 1520-5126
PubMed: 37639365
DOI: 10.1021/JACS.3C03645