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Lead in PDB 3ec8: The Crystal Structure of the Ra Domain of FLJ10324 (Radil)

Protein crystallography data

The structure of The Crystal Structure of the Ra Domain of FLJ10324 (Radil), PDB code: 3ec8 was solved by M.Wisniewska, L.Lehtio, J.Andersson, C.H.Arrowsmith, R.Collins, L.G.Dahlgren, A.M.Edwards, S.Flodin, A.Flores, S.Graslund, M.Hammarstrom, A.Johansson, I.Johansson, T.Karlberg, T.Kotenyova, M.Moche, M.E.Nilsson, P.Nordlund, T.Nyman, K.Olesen, C.Persson, J.Sagemark, H.Schueler, A.G.Thorsell, L.Tresaugues, S.Van Den Berg, J.Weigelt, M.Welin, M.Wikstrom, H.Berglund, Structural Genomics Consortium (Sgc), with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 11.63 / 2.60
Space group P 31 1 2
Cell size a, b, c (Å), α, β, γ (°) 46.080, 46.080, 135.610, 90.00, 90.00, 120.00
R / Rfree (%) 22.7 / 27

Other elements in 3ec8:

The structure of The Crystal Structure of the Ra Domain of FLJ10324 (Radil) also contains other interesting chemical elements:

Chlorine (Cl) 1 atom

Lead Binding Sites:

The binding sites of Lead atom in the The Crystal Structure of the Ra Domain of FLJ10324 (Radil) (pdb code 3ec8). This binding sites where shown within 5.0 Angstroms radius around Lead atom.
In total 2 binding sites of Lead where determined in the The Crystal Structure of the Ra Domain of FLJ10324 (Radil), PDB code: 3ec8:
Jump to Lead binding site number: 1; 2;

Lead binding site 1 out of 2 in 3ec8

Go back to Lead Binding Sites List in 3ec8
Lead binding site 1 out of 2 in the The Crystal Structure of the Ra Domain of FLJ10324 (Radil)


Mono view


Stereo pair view

A full contact list of Lead with other atoms in the Pb binding site number 1 of The Crystal Structure of the Ra Domain of FLJ10324 (Radil) within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Pb194

b:0.6
occ:0.25
CB A:THR74 4.6 44.6 1.0
CD1 A:LEU102 4.6 41.6 1.0
CA A:GLY69 4.8 29.5 1.0

Lead binding site 2 out of 2 in 3ec8

Go back to Lead Binding Sites List in 3ec8
Lead binding site 2 out of 2 in the The Crystal Structure of the Ra Domain of FLJ10324 (Radil)


Mono view


Stereo pair view

A full contact list of Lead with other atoms in the Pb binding site number 2 of The Crystal Structure of the Ra Domain of FLJ10324 (Radil) within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Pb2

b:0.3
occ:0.50
O A:HOH203 2.7 40.1 1.0
O A:LEU45 3.3 43.2 1.0
OE1 A:GLU43 3.9 55.9 1.0
C A:LEU45 4.5 43.4 1.0
CA A:TYR46 4.8 43.2 1.0
CD A:GLU43 5.0 54.2 1.0

Reference:

M.Wisniewska, L.Lehtio, J.Andersson, C.H.Arrowsmith, R.Collins, L.G.Dahlgren, A.M.Edwards, S.Flodin, A.Flores, S.Graslund, M.Hammarstrom, A.Johansson, I.Johansson, T.Karlberg, T.Kotenyova, M.Moche, M.E.Nilsson, P.Nordlund, T.Nyman, K.Olesen, C.Persson, J.Sagemark, H.Schueler, A.G.Thorsell, L.Tresaugues, S.Van Den Berg, J.Weigelt, M.Welin, M.Wikstrom, H.Berglund. The Crystal Structure of the Ra Domain of FLJ10324 (Radil) To Be Published.
Page generated: Thu Oct 10 10:05:55 2024

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