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Lead in PDB 7d31: The Tba-PB2+ Complex in P41212 Space Group

Protein crystallography data

The structure of The Tba-PB2+ Complex in P41212 Space Group, PDB code: 7d31 was solved by H.H.Liu, Y.Q.Gao, J.Sheng, J.H.Gan, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 27.23 / 1.40
Space group P 41 21 2
Cell size a, b, c (Å), α, β, γ (°) 40.017, 40.017, 99.896, 90, 90, 90
R / Rfree (%) 12.6 / 14.8

Lead Binding Sites:

The binding sites of Lead atom in the The Tba-PB2+ Complex in P41212 Space Group (pdb code 7d31). This binding sites where shown within 5.0 Angstroms radius around Lead atom.
In total 2 binding sites of Lead where determined in the The Tba-PB2+ Complex in P41212 Space Group, PDB code: 7d31:
Jump to Lead binding site number: 1; 2;

Lead binding site 1 out of 2 in 7d31

Go back to Lead Binding Sites List in 7d31
Lead binding site 1 out of 2 in the The Tba-PB2+ Complex in P41212 Space Group


Mono view


Stereo pair view

A full contact list of Lead with other atoms in the Pb binding site number 1 of The Tba-PB2+ Complex in P41212 Space Group within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Pb101

b:15.3
occ:1.00
O6 A:DG10 2.6 13.7 1.0
O6 A:DG5 2.6 14.5 1.0
O6 A:DG1 2.6 14.0 1.0
O6 A:DG14 2.6 12.9 1.0
O6 A:DG2 2.6 13.2 1.0
O6 A:DG11 2.7 13.8 1.0
O6 A:DG15 2.7 13.2 1.0
O6 A:DG6 2.7 14.2 1.0
C6 A:DG5 3.5 14.5 1.0
C6 A:DG1 3.5 12.6 1.0
C6 A:DG14 3.5 13.6 1.0
C6 A:DG10 3.5 14.2 1.0
C6 A:DG11 3.6 11.5 1.0
C6 A:DG2 3.6 13.7 1.0
C6 A:DG15 3.7 12.5 1.0
C6 A:DG6 3.7 14.3 1.0
N1 A:DG5 3.9 13.2 1.0
N1 A:DG11 3.9 12.4 1.0
N1 A:DG2 3.9 13.8 1.0
N1 A:DG10 3.9 14.7 1.0
N1 A:DG14 3.9 13.8 1.0
N1 A:DG1 3.9 13.6 1.0
N1 A:DG15 4.0 14.2 1.0
N1 A:DG6 4.0 14.3 1.0
C5 A:DG1 4.7 13.8 1.0
C5 A:DG5 4.7 14.2 1.0
C5 A:DG14 4.7 14.2 1.0
C7 A:DT9 4.8 15.5 1.0
C5 A:DG10 4.8 14.8 1.0
C5 A:DG11 4.9 14.4 1.0
C5 A:DG2 4.9 13.1 1.0
C5 A:DG15 5.0 13.8 1.0

Lead binding site 2 out of 2 in 7d31

Go back to Lead Binding Sites List in 7d31
Lead binding site 2 out of 2 in the The Tba-PB2+ Complex in P41212 Space Group


Mono view


Stereo pair view

A full contact list of Lead with other atoms in the Pb binding site number 2 of The Tba-PB2+ Complex in P41212 Space Group within 5.0Å range:
probe atom residue distance (Å) B Occ
B:Pb101

b:15.8
occ:1.00
O6 B:DG1 2.6 14.6 1.0
O6 B:DG14 2.6 12.4 1.0
O6 B:DG5 2.6 14.2 1.0
O6 B:DG11 2.6 15.4 1.0
O6 B:DG10 2.7 16.0 1.0
O6 B:DG2 2.7 13.7 1.0
O6 B:DG15 2.7 14.1 1.0
O6 B:DG6 2.8 13.6 1.0
C6 B:DG5 3.5 14.3 1.0
C6 B:DG1 3.5 13.4 1.0
C6 B:DG14 3.5 13.1 1.0
C6 B:DG11 3.6 13.4 1.0
C6 B:DG10 3.6 16.1 1.0
C6 B:DG2 3.7 13.1 1.0
C6 B:DG15 3.7 14.4 1.0
C6 B:DG6 3.7 13.8 1.0
N1 B:DG5 3.8 13.7 1.0
N1 B:DG14 3.9 14.7 1.0
N1 B:DG11 3.9 14.8 1.0
N1 B:DG1 3.9 13.3 1.0
N1 B:DG10 3.9 13.5 1.0
N1 B:DG2 3.9 13.6 1.0
N1 B:DG15 4.0 13.0 1.0
N1 B:DG6 4.0 13.8 1.0
C5 B:DG1 4.7 13.3 1.0
C5 B:DG5 4.7 14.0 1.0
C7 B:DT9 4.7 15.0 1.0
C5 B:DG14 4.7 14.3 1.0
C5 B:DG10 4.8 14.9 1.0
C5 B:DG11 4.9 14.5 1.0
C5 B:DG2 5.0 14.0 1.0
C5 B:DG15 5.0 13.5 1.0

Reference:

H.H.Liu, Y.Q.Gao, J.Sheng, J.H.Gan. The Tba-PB2+ Complex in P41212 Space Group To Be Published.
Page generated: Fri Sep 24 16:35:55 2021

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