Lead in PDB 4dl0: Crystal Structure of the Heterotrimeric Egchead Peripheral Stalk Complex of the Yeast Vacuolar Atpase

All present enzymatic activity of Crystal Structure of the Heterotrimeric Egchead Peripheral Stalk Complex of the Yeast Vacuolar Atpase:
3.6.3.14;

The structure of Crystal Structure of the Heterotrimeric Egchead Peripheral Stalk Complex of the Yeast Vacuolar Atpase, PDB code: 4dl0 was solved by R.A.Oot, L.S.Huang, E.A.Berry, S.Wilkens, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å)	39.71 / 2.91
Space group	P 21 21 21
Cell size a, b, c (Å), α, β, γ (°)	95.790, 105.611, 120.486, 90.00, 90.00, 90.00
R / Rfree (%)	20.8 / 25.7

The binding sites of Lead atom in the Crystal Structure of the Heterotrimeric Egchead Peripheral Stalk Complex of the Yeast Vacuolar Atpase (pdb code 4dl0). This binding sites where shown within 5.0 Angstroms radius around Lead atom.
In total 2 binding sites of Lead where determined in the Crystal Structure of the Heterotrimeric Egchead Peripheral Stalk Complex of the Yeast Vacuolar Atpase, PDB code: 4dl0:
Jump to Lead binding site number: 1; 2;

Lead binding site 1 out of 2 in the Crystal Structure of the Heterotrimeric Egchead Peripheral Stalk Complex of the Yeast Vacuolar Atpase


Mono view


Stereo pair view

A full contact list of Lead with other atoms in the Pb binding site number 1 of Crystal Structure of the Heterotrimeric Egchead Peripheral Stalk Complex of the Yeast Vacuolar Atpase within 5.0Å range: probe atom residue distance (Å) B Occ J:Pb301 b:0.1 occ:0.48 OE1 J:GLU221 3.3 0.8 1.0 OE2 C:GLU153 3.3 0.6 1.0 OE1 C:GLU153 3.7 0.5 1.0 CD C:GLU153 3.9 0.9 1.0 CD J:GLU221 4.1 0.2 1.0 CD1 K:ILE97 4.4 77.2 1.0 OE2 J:GLU221 4.5 0.3 1.0 CG2 K:VAL94 4.7 74.2 1.0

Lead binding site 2 out of 2 in the Crystal Structure of the Heterotrimeric Egchead Peripheral Stalk Complex of the Yeast Vacuolar Atpase


Mono view


Stereo pair view

A full contact list of Lead with other atoms in the Pb binding site number 2 of Crystal Structure of the Heterotrimeric Egchead Peripheral Stalk Complex of the Yeast Vacuolar Atpase within 5.0Å range: probe atom residue distance (Å) B Occ E:Pb301 b:0.1 occ:0.59 OE1 E:GLU221 3.3 0.4 1.0 OE1 I:GLU153 3.5 0.9 1.0 OE2 I:GLU153 3.8 0.4 1.0 CD E:GLU221 4.0 0.4 1.0 CD I:GLU153 4.1 0.2 1.0 OE2 E:GLU221 4.3 0.6 1.0 CD1 G:ILE97 4.5 64.5 1.0 CG2 G:VAL94 5.0 59.9 1.0

R.A.Oot, L.S.Huang, E.A.Berry, S.Wilkens. Crystal Structure of the Yeast Vacuolar Atpase Heterotrimeric Egc(Head) Peripheral Stalk Complex. Structure V. 20 1881 2012.
ISSN: ISSN 0969-2126
PubMed: 23000382
DOI: 10.1016/J.STR.2012.08.020