Lead in PDB 1sn8: Crystal Structure of the S1 Domain of Rnase E From E. Coli (Pb Derivative)

The structure of Crystal Structure of the S1 Domain of Rnase E From E. Coli (Pb Derivative), PDB code: 1sn8 was solved by M.Schubert, R.E.Edge, P.Lario, M.A.Cook, N.C.J.Strynadka, G.A.Mackie, L.P.Mcintosh, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å)	25.00 / 2.00
Space group	P 41 21 2
Cell size a, b, c (Å), α, β, γ (°)	70.580, 70.580, 87.902, 90.00, 90.00, 90.00
R / Rfree (%)	18.2 / 23.2

The binding sites of Lead atom in the Crystal Structure of the S1 Domain of Rnase E From E. Coli (Pb Derivative) (pdb code 1sn8). This binding sites where shown within 5.0 Angstroms radius around Lead atom.
In total 2 binding sites of Lead where determined in the Crystal Structure of the S1 Domain of Rnase E From E. Coli (Pb Derivative), PDB code: 1sn8:
Jump to Lead binding site number: 1; 2;

Lead binding site 1 out of 2 in the Crystal Structure of the S1 Domain of Rnase E From E. Coli (Pb Derivative)


Mono view


Stereo pair view

A full contact list of Lead with other atoms in the Pb binding site number 1 of Crystal Structure of the S1 Domain of Rnase E From E. Coli (Pb Derivative) within 5.0Å range: probe atom residue distance (Å) B Occ A:Pb604 b:27.4 occ:0.60 NE2 A:HIS85 2.5 17.8 1.0 CD2 A:HIS85 3.4 19.8 1.0 CE1 A:HIS85 3.5 21.2 1.0 CG A:HIS85 4.6 17.9 1.0 ND1 A:HIS85 4.6 20.7 1.0

Lead binding site 2 out of 2 in the Crystal Structure of the S1 Domain of Rnase E From E. Coli (Pb Derivative)


Mono view


Stereo pair view

A full contact list of Lead with other atoms in the Pb binding site number 2 of Crystal Structure of the S1 Domain of Rnase E From E. Coli (Pb Derivative) within 5.0Å range: probe atom residue distance (Å) B Occ A:Pb605 b:35.7 occ:0.16 OE2 A:GLU72 2.2 23.0 1.0 OE1 A:GLU72 2.9 19.2 1.0 CD A:GLU72 2.9 19.3 1.0 O A:HOH724 2.9 37.0 1.0 O A:HOH712 4.1 37.5 1.0 CG A:GLU72 4.4 16.4 1.0 OD2 A:ASP105 4.9 42.5 1.0 OG1 A:THR117 5.0 15.9 1.0

M.Schubert, R.E.Edge, P.Lario, M.A.Cook, N.C.Strynadka, G.A.Mackie, L.P.Mcintosh. Structural Characterization of the Rnase E S1 Domain and Identification of Its Oligonucleotide-Binding and Dimerization Interfaces. J.Mol.Biol. V. 341 37 2004.
ISSN: ISSN 0022-2836
PubMed: 15312761
DOI: 10.1016/J.JMB.2004.05.061