Lead in PDB 1na0: Design of Stable Alpha-Helical Arrays From An Idealized Tpr Motif

The structure of Design of Stable Alpha-Helical Arrays From An Idealized Tpr Motif, PDB code: 1na0 was solved by E.Main, Y.Xiong, M.Cocco, L.D'andrea, L.Regan, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å)	33.90 / 1.60
Space group	C 1 2 1
Cell size a, b, c (Å), α, β, γ (°)	102.734, 46.560, 52.517, 90.00, 99.11, 90.00
R / Rfree (%)	18.3 / 21.6

The structure of Design of Stable Alpha-Helical Arrays From An Idealized Tpr Motif also contains other interesting chemical elements:

Magnesium	(Mg)	1 atom
Chlorine	(Cl)	1 atom
Sodium	(Na)	2 atoms

The binding sites of Lead atom in the Design of Stable Alpha-Helical Arrays From An Idealized Tpr Motif (pdb code 1na0). This binding sites where shown within 5.0 Angstroms radius around Lead atom.
In total 5 binding sites of Lead where determined in the Design of Stable Alpha-Helical Arrays From An Idealized Tpr Motif, PDB code: 1na0:
Jump to Lead binding site number: 1; 2; 3; 4; 5;

Lead binding site 1 out of 5 in the Design of Stable Alpha-Helical Arrays From An Idealized Tpr Motif


Mono view


Stereo pair view

A full contact list of Lead with other atoms in the Pb binding site number 1 of Design of Stable Alpha-Helical Arrays From An Idealized Tpr Motif within 5.0Å range: probe atom residue distance (Å) B Occ A:Pb275 b:59.6 occ:0.25 OH A:TYR99 2.2 15.1 1.0 CZ A:TYR99 3.2 12.4 1.0 OE1 A:GLU98 3.5 28.6 1.0 O A:HOH422 3.6 56.7 1.0 CE1 A:TYR99 3.9 12.3 1.0 CE2 A:TYR99 4.0 14.6 1.0 O A:HOH421 4.0 53.4 1.0 CD A:GLU98 4.5 23.0 1.0 CG A:GLU95 4.6 17.7 1.0

Lead binding site 2 out of 5 in the Design of Stable Alpha-Helical Arrays From An Idealized Tpr Motif


Mono view


Stereo pair view

A full contact list of Lead with other atoms in the Pb binding site number 2 of Design of Stable Alpha-Helical Arrays From An Idealized Tpr Motif within 5.0Å range: probe atom residue distance (Å) B Occ A:Pb278 b:48.6 occ:0.15 OE1 A:GLU64 2.2 26.5 1.0 OE2 A:GLU61 2.4 32.5 1.0 O A:HOH281 2.6 54.6 1.0 CD A:GLU61 3.3 25.2 1.0 CD A:GLU64 3.4 24.8 1.0 OE1 A:GLU61 3.6 32.0 1.0 OE2 A:GLU64 4.0 29.1 1.0 CG A:GLU61 4.6 18.5 1.0 CB A:GLU64 4.6 13.7 1.0 CG A:GLU64 4.6 17.7 1.0 OH A:TYR65 4.8 17.0 1.0 CA A:GLU61 4.9 12.9 1.0

Lead binding site 3 out of 5 in the Design of Stable Alpha-Helical Arrays From An Idealized Tpr Motif


Mono view


Stereo pair view

A full contact list of Lead with other atoms in the Pb binding site number 3 of Design of Stable Alpha-Helical Arrays From An Idealized Tpr Motif within 5.0Å range: probe atom residue distance (Å) B Occ B:Pb274 b:47.5 occ:0.35 OE2 B:GLU30 2.2 27.5 1.0 CD B:GLU30 3.1 23.9 1.0 OE1 B:GLU30 3.5 28.0 1.0 O B:HOH452 3.7 45.5 1.0 CG B:GLU30 4.4 18.5 1.0

Lead binding site 4 out of 5 in the Design of Stable Alpha-Helical Arrays From An Idealized Tpr Motif


Mono view


Stereo pair view

A full contact list of Lead with other atoms in the Pb binding site number 4 of Design of Stable Alpha-Helical Arrays From An Idealized Tpr Motif within 5.0Å range: probe atom residue distance (Å) B Occ B:Pb276 b:55.7 occ:0.15 OE1 B:GLU95 2.4 28.0 1.0 CD B:GLU95 3.0 24.4 1.0 OE2 B:GLU95 3.2 23.2 1.0 CG B:GLU95 4.2 20.0 1.0 O B:HOH359 4.4 53.3 1.0 CG B:GLU98 4.6 16.4 1.0 CB B:GLU98 4.8 12.3 1.0 OH B:TYR99 4.9 17.6 1.0 CD B:GLU98 5.0 22.2 1.0

Lead binding site 5 out of 5 in the Design of Stable Alpha-Helical Arrays From An Idealized Tpr Motif


Mono view


Stereo pair view

A full contact list of Lead with other atoms in the Pb binding site number 5 of Design of Stable Alpha-Helical Arrays From An Idealized Tpr Motif within 5.0Å range: probe atom residue distance (Å) B Occ B:Pb277 b:54.5 occ:0.15 OD2 B:ASP58 2.1 22.3 1.0 NE2 B:GLN56 3.0 21.8 1.0 CG B:ASP58 3.2 16.8 1.0 OD1 B:ASP58 3.4 16.2 1.0 CD B:GLN56 3.9 19.8 1.0 CB B:GLN56 4.3 12.9 1.0 OE1 B:GLN56 4.5 22.8 1.0 CB B:ASP58 4.5 11.7 1.0 CG B:GLN56 4.7 15.1 1.0

E.Main, Y.Xiong, M.Cocco, L.D'andrea, L.Regan. Design of Stable Alpha-Helical Arrays From An Idealized Tpr Motif Structure V. 11 497 2003.
ISSN: ISSN 0969-2126
PubMed: 12737816
DOI: 10.1016/S0969-2126(03)00076-5